MicroRazerS Tool name | MicroRazerS |
---|
URL | www.seqan.de/projects/microrazers.html |
---|
Important features | 1. It is a small RNA mapping tool which is faster than the mega BLAST.
2. It can map easily short RNAs to the reference genome and find SNPs and sequencing errors.
3. It is useful for identification and quantification of miRNAs. |
---|
Citations | Emde AK, Grunert M, Weese D, Reinert K, Sperling SR. MicroRazerS: rapid
alignment of small RNA reads. Bioinformatics. 2010 Jan 1;26(1):123-4. Epub 2009
Oct 29. PubMed PMID: 19880369. |
---|
Year of publication | 2010 |
---|
Rank by usage frequency | 100 |
---|
Comments | |
---|
Function | RNA seq alignment |
---|
Category | Free, Downloadable |
---|
License | |
---|
Status | |
---|
Input file format | |
---|
Output file format | |
---|
Operating system | Linux 64 bit, Windows, Mac OS X |
---|
Operating language | C++ |
---|
Platform | Illumina / Solexa |
---|
Maintained by | |
---|
Downloadable file format | |
---|
Submission file format | |
---|
| |