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A compilation and categorization of next-generation sequencing resources

MicroRazerS

Tool nameMicroRazerS
URLwww.seqan.de/projects/microrazers.html
Important features1. It is a small RNA mapping tool which is faster than the mega BLAST. 2. It can map easily short RNAs to the reference genome and find SNPs and sequencing errors. 3. It is useful for identification and quantification of miRNAs.
CitationsEmde AK, Grunert M, Weese D, Reinert K, Sperling SR. MicroRazerS: rapid alignment of small RNA reads. Bioinformatics. 2010 Jan 1;26(1):123-4. Epub 2009 Oct 29. PubMed PMID: 19880369.
Year of publication2010
Rank by usage frequency100
Comments
FunctionRNA seq alignment
CategoryFree, Downloadable
License
Status
Input file format
Output file format
Operating systemLinux 64 bit, Windows, Mac OS X
Operating languageC++
PlatformIllumina / Solexa
Maintained by
Downloadable file format
Submission file format

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